The Snipper 3

app suite




Tissue prediction with DNA methylation: 8 CpGs, MiSeq

1) Input the methylation values for the eight CpGs shown on the table below. Blanks will be ignored:

GeneInternal codeCpG IDGRCh38 chromosome position
EDARADDEDARADD_C1cg09809672chr1:236394383
TRIM59TRIM59_C1NAchr3:160450172
ELOVL2ELOVL2_C6NAchr6:11044640
MIR29B2CHGMIR29B2CHG_C3NAchr1:207823672
PDE4CPDE4C_C3cg17861230chr19:18233091
ASPAASPA_C1cg02228185chr17:3476273
FHL2FHL2_C10NAchr2: 105399327
KLF14KLF14_C1cg14361627chr7:130734355


Name EDARADD TRIM59 ELOVL2 MIR29B2CHG PDE4C ASPA FHL2 KLF14
Values


        

You can also download several prediction examples.




Last revision: May 2024

Acknowledgements: This study received support from the European Union’s Horizon 2020 Research and Innovation Programme under grant agreement No. 740580 within the framework of the Visible Attributes through Genomics (VISAGE) Project and Consortium and institutional grant for young scientists from the Medical University 342 of Silesia in Katowice, Poland (grant no. PCN-2–120/N/0/O).